chore: prune unused imports and duplicate import redefinitions

Remove unused imports (F401) and duplicate/shadowed import
redefinitions (F811) across the codebase using ruff's safe
autofixes. No behavioral changes -- imports only.

- ~1400 safe autofixes applied across 644 files (net -1072 lines)
- __init__.py re-exports preserved (excluded from F401 removal so
  public re-export surfaces stay intact)
- Re-exports that are imported or monkeypatched by tests but look
  unused in their defining module are kept with explicit # noqa:
  F401 (gateway/run.py load_dotenv; run_agent re-exports from
  agent.message_sanitization, agent.context_compressor,
  agent.retry_utils, agent.prompt_builder, agent.process_bootstrap,
  agent.codex_responses_adapter)
- Unsafe F841 (unused-variable) fixes deliberately skipped -- those
  can change behavior when the RHS has side effects
- ruff lints remain disabled in pyproject.toml (only PLW1514 is
  selected); this is a one-time cleanup, not a config change

Verification:
- python -m compileall: clean
- pytest --collect-only: all 27161 tests collect (zero import errors)
- core entry points import clean (run_agent, model_tools, cli,
  toolsets, hermes_state, batch_runner, gateway)
- static scan: every name any test imports directly from an edited
  module still resolves

tests/agent/test_rate_limit_tracker.py

@@ -189,14 +189,11 @@ class TestAgentIntegration:
 
     def test_capture_rate_limits_from_headers(self):
         """Simulate the header capture path without a real API call."""
-        import sys
-        import os
         # Use a mock httpx-like response
         class MockResponse:
             headers = NOUS_HEADERS
 
         # Import AIAgent minimally
-        from unittest.mock import MagicMock, patch
 
         # Test the parsing directly
         state = parse_rate_limit_headers(MockResponse.headers, provider="nous")